5MRX
27-nt SRL with a 5-hydroxymethyl cytidine modification
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-27 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.77 |
| Spacegroup name | P 43 |
| Unit cell lengths | 29.510, 29.510, 76.800 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.510 - 0.851 |
| R-factor | 0.1587 |
| Rwork | 0.145 |
| R-free | 0.16820 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3dvz |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.123 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | |
| Low resolution limit [Å] | 50.000 |
| High resolution limit [Å] | 0.850 |
| Rmeas | 0.045 |
| Number of reflections | 57106 |
| <I/σ(I)> | 30.32 |
| Completeness [%] | 99.6 |
| Redundancy | 22.36 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | well: 3.0M (NH4)2SO4 drop: 50mM KMops pH7.0, 10mM MnCl2, 10mM MgCl2, 1.0mM Na-EDTA pH 8.0, 10mM Tris pH 8.0, RNA 2.5mg/ml 2vol drop + 1vol well |






