5MPO
Crystal structure of human molybdopterin synthase complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97626 |
Spacegroup name | P 65 |
Unit cell lengths | 123.720, 123.720, 82.490 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 61.860 - 2.430 |
R-factor | 0.20718 |
Rwork | 0.205 |
R-free | 0.25860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2Q5W:D 4AP8:A |
RMSD bond length | 0.016 |
RMSD bond angle | 1.765 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.860 | 2.490 |
High resolution limit [Å] | 2.430 | 2.430 |
Rmerge | 0.062 | 0.955 |
Rpim | 0.028 | 0.472 |
Number of reflections | 27171 | |
<I/σ(I)> | 15.8 | 1.6 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.8 | 6.1 |
CC(1/2) | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 283 | 12% PEG3350 -- 0.1M potassium nitrate -- 0.05M potassium thiocyanate |