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5MG9

Putative Ancestral Mamba toxin 1 (AncTx1-W28R/I38S)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-01-29
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.965
Spacegroup nameP 31 2 1
Unit cell lengths41.057, 41.057, 67.118
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution35.556 - 1.801
R-factor0.2056
Rwork0.203
R-free0.23650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4iye
RMSD bond length0.004
RMSD bond angle0.809
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.5561.910
High resolution limit [Å]1.8001.800
Rmerge0.1111.530
Number of reflections11687
<I/σ(I)>12.241.16
Completeness [%]100.0100
Redundancy8.38.2
CC(1/2)0.9990.719
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5293Protein: lyophilized synthetic toxin at 5 mg/mL in 1 M Na Acetate pH 5.5. Precipitant: 1.9 M ammonium sulfate, 4 % MPD, 2 % 1,4-dioxane, 2 % gamma-valerolactone, 0.132 M sodium citrate, pH 5.5. Cryoprotectant: 80% saturated lithium sulfate, 10% Dioxane, 10% gamma-valerolactone

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PDB entries from 2024-05-15

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