5LZL
Pyrobaculum calidifontis 5-aminolaevulinic acid dehydratase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-12 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.04 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 205.561, 205.561, 199.171 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 178.020 - 3.470 |
R-factor | 0.1528 |
Rwork | 0.148 |
R-free | 0.25002 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1b4e |
RMSD bond length | 0.013 |
RMSD bond angle | 1.884 |
Data reduction software | MOSFLM (5.8.0107) |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 178.020 | 3.600 |
High resolution limit [Å] | 3.470 | 3.470 |
Rmerge | 0.118 | 0.548 |
Number of reflections | 63352 | |
<I/σ(I)> | 14.7 | 4.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 9.8 | 9.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 290 | Protein buffer was 10 mM Tris-HCl pH 8.0. Protein concentration 5 mg/ml. It was crystallised in the presence of 1 mM levulinic acid with 0.1 M HEPES pH 7.5, 10 % isopropanol and 20 % polyethylene glycol (PEG) 4000 in the well solution. |