5LUB
Crystal structure of human legumain (AEP) in complex with compound 11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-07 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.873 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.520, 75.040, 172.970 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.800 - 2.100 |
R-factor | 0.223 |
Rwork | 0.221 |
R-free | 0.25300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4awa |
RMSD bond length | 0.005 |
RMSD bond angle | 1.029 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.800 | 2.170 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.120 | 0.820 |
Number of reflections | 34046 | |
<I/σ(I)> | 10.2 | 2.8 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 6 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 22 % PEG 3350, 0.1 M sodium acetate pH 4.5 |