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5LTI

Crystal structure of the alpha subunit of heme dependent oxidative N-demethylase (HODM) in complex with the dimethylamine substrate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2012-04-26
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.917
Spacegroup nameP 43 21 2
Unit cell lengths80.212, 80.212, 144.608
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.360 - 1.900
R-factor0.17424
Rwork0.173
R-free0.20101
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)5lte
RMSD bond length0.025
RMSD bond angle2.113
Data reduction softwareXDS
Data scaling softwareXDS
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.3602.010
High resolution limit [Å]1.9001.900
Rmerge0.0570.306
Number of reflections36266
<I/σ(I)>13.74.5
Completeness [%]100.0100
Redundancy1212
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP277The HODM-heme subunit was crystallised at 3 mg ml-1 in 50 mM KPi, 100 mM KCl, pH 7.5. Initial crystallisation conditions were identified using the JCSG+ matrix screen (Molecular dimensions). Crystals suitable for diffraction experiments were obtained by sitting drop vapour diffusion at 277 K in 400 nL drops containing equal volumes of protein and a solution containing 30% PEG 2K MME and 0.1 M potassium thiocyanate.

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