Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LOP

Structure of the active form of /K. lactis/ Dcp1-Dcp2-Edc3 decapping complex bound to m7GDP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyPIXEL
Collection date2016-02-24
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.0725
Spacegroup nameP 64 2 2
Unit cell lengths219.810, 219.810, 74.190
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.200 - 3.500
R-factor0.203
Rwork0.200
R-free0.26600
Structure solution methodMAD
RMSD bond length0.010
RMSD bond angle1.310
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareautoSHARP
Refinement softwareBUSTER (2.10.2)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2003.820
High resolution limit [Å]3.5003.500
Rmerge0.0261.380
Number of reflections13907
<I/σ(I)>19.40.9
Completeness [%]99.899
Redundancy21.221.2
CC(1/2)0.9980.362
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP27725% PEG 400, 100 mM MgCl2

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon