Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5LGG

The N-terminal WD40 domain of Apc1 (Anaphase promoting complex subunit 1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2014-11-24
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths82.633, 113.262, 100.436
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.131 - 2.150
R-factor0.181
Rwork0.179
R-free0.22650
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ui9
RMSD bond length0.009
RMSD bond angle1.198
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (dev_1810)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.1312.223
High resolution limit [Å]2.1502.150
Rmerge0.0590.433
Number of reflections25408
<I/σ(I)>16.762.01
Completeness [%]97.884.7
Redundancy4.82.5
CC(1/2)0.9990.891
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP52770.1 M citric acid, pH5.0, 2M NaCl

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon