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5LAP

p53 cancer mutant Y220C with Cys182 alkylation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2014-03-09
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.976
Spacegroup nameP 21 21 21
Unit cell lengths65.108, 71.085, 105.252
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution58.910 - 1.420
R-factor0.17862
Rwork0.178
R-free0.19321
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2j1x
RMSD bond length0.007
RMSD bond angle1.306
Refinement softwareREFMAC (5.8.0151)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.9101.500
High resolution limit [Å]1.4201.420
Rmerge0.0640.570
Number of reflections92560
<I/σ(I)>17.43.9
Completeness [%]99.899.5
Redundancy5.55.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293PROTEIN SOLUTION: 6 MG/ML PROTEIN IN 25 MM SODIUM PHOSPHATE, PH 7.2, 150 MM KCL, 5 MM DTT. RESERVOIR BUFFER: 100 MM HEPES, PH 7.2, 19% (W/V) POLYETHYLENE GLYCOL 4000, 5 MM DTT. SOAKING BUFFER: 30 mM Phikan11000 IN 100 MM HEPES, PH 7.2, 10 MM SODIUM PHOSPHATE, PH 7.2, 19% (W/V) POLYETHYLENE GLYCOL 4000, 20 % (V/V) GLYCEROL, 150 MM KCL.

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PDB entries from 2024-05-15

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