5KZZ
Crystal structure of the xenopus Smoothened cysteine-rich domain (CRD) in its apo-form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-08-26 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 1 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 67.656, 37.352, 43.151 |
| Unit cell angles | 90.00, 97.46, 90.00 |
Refinement procedure
| Resolution | 32.634 - 1.332 |
| R-factor | 0.1575 |
| Rwork | 0.156 |
| R-free | 0.18710 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5kzv |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.182 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.350 |
| High resolution limit [Å] | 1.330 | 3.610 | 1.330 |
| Rmerge | 0.033 | 0.019 | 0.372 |
| Rmeas | 0.039 | 0.023 | 0.472 |
| Rpim | 0.022 | 0.013 | 0.286 |
| Total number of observations | 75788 | ||
| Number of reflections | 24147 | ||
| <I/σ(I)> | 14.9 | ||
| Completeness [%] | 98.4 | 95.5 | 83.5 |
| Redundancy | 3.1 | 3.2 | 2.2 |
| CC(1/2) | 0.987 | 0.798 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.2M zinc acetate and 20% PEG 3350 |
