5KXE
Wisteria floribunda lectin in complex with GalNAc(beta1-4)GlcNAc (LacdiNAc) at pH 4.2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.584, 97.943, 149.158 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 2.090 |
R-factor | 0.1822 |
Rwork | 0.181 |
R-free | 0.21170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5kxc |
RMSD bond length | 0.010 |
RMSD bond angle | 1.558 |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.010 | 30.000 | 2.150 |
High resolution limit [Å] | 2.090 | 4.780 | 2.090 |
Rmerge | 0.145 | 0.038 | 0.774 |
Rmeas | 0.156 | 0.041 | 0.833 |
Rpim | 0.057 | 0.015 | 0.305 |
Total number of observations | 502533 | ||
Number of reflections | 67430 | ||
<I/σ(I)> | 5.9 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 7.5 | 7.1 | 7.5 |
CC(1/2) | 0.999 | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 291.15 | 0.2 M Lithium Sulfate 0.1 M phosphate-citrate pH 4.2 20% (w/v) PEG 1000 |