5KWG
Crystal structure of extracellular domain of HER2 in complex with Fcab H10-03-6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-05 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9677 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 109.770, 109.770, 176.070 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.532 - 4.300 |
R-factor | 0.3283 |
Rwork | 0.324 |
R-free | 0.36860 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5k33 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.595 |
Data reduction software | XDS (v.Oct-2015) |
Data scaling software | XDS (v.Oct-2015) |
Phasing software | PHENIX (1.10-2247) |
Refinement software | PHENIX ((dev_2247: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.532 | 4.454 |
High resolution limit [Å] | 4.300 | 4.300 |
Rmerge | 0.190 | 1.550 |
Number of reflections | 8755 | |
<I/σ(I)> | 6.48 | 0.99 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.3 | 6 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 295 | 50 mM Citric acid, 18% (w/v) PEG 3350 |