5KV9
Crystal structure of a hPIV haemagglutinin-neuraminidase-inhibitor complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-01-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 80.098, 107.373, 94.492 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.874 - 2.000 |
R-factor | 0.1639 |
Rwork | 0.162 |
R-free | 0.20550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xjq |
RMSD bond length | 0.009 |
RMSD bond angle | 1.286 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.050 | 40.050 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.061 | 0.025 | 0.259 |
Rmeas | 0.070 | 0.029 | 0.303 |
Rpim | 0.033 | 0.014 | 0.152 |
Total number of observations | 98693 | 1131 | 4970 |
Number of reflections | 24135 | ||
<I/σ(I)> | 17.8 | 40.8 | 5.2 |
Completeness [%] | 87.2 | 78.9 | 76.3 |
Redundancy | 4.1 | 4.1 | 3.2 |
CC(1/2) | 0.998 | 0.999 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293.15 | 0.1 M citrate buffer, 0.2 M ammonium sulfate, 20 % PEG 3000 |