5KRV
1-deoxy-D-xylulose 5-phosphate reductoisomerase from Vibrio vulnificus in complex Arginine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-29 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 65.165, 149.129, 245.089 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.300 |
R-factor | 0.18701 |
Rwork | 0.186 |
R-free | 0.21469 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5kqo |
RMSD bond length | 0.011 |
RMSD bond angle | 1.392 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.074 | 0.766 |
Number of reflections | 53084 | |
<I/σ(I)> | 22.7 | 1.6 |
Completeness [%] | 99.5 | 98.2 |
Redundancy | 7.9 | 7.5 |
CC(1/2) | 0.871 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.8 M Sodium potassium tartrate 20% (w/v) PEG 3350 5 mM Arginine |