5KR4
Directed Evolution of Transaminases By Ancestral Reconstruction. Using Old Proteins for New Chemistries
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.95370 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.053, 121.783, 125.629 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.800 - 2.000 |
R-factor | 0.19381 |
Rwork | 0.192 |
R-free | 0.22415 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5kqt |
RMSD bond length | 0.013 |
RMSD bond angle | 1.565 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.800 | 2.040 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.156 | 0.726 |
Number of reflections | 70329 | |
<I/σ(I)> | 10.4 | 2.4 |
Completeness [%] | 99.8 | 97.1 |
Redundancy | 7.3 | 7 |
CC(1/2) | 0.993 | 0.756 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 150 plus 150 nL drops with protein at 10 mg/mL and reservoir conditions of 12% PEG 8000, 15% glycerol, 150 mM MgCl2, 100 mM Tris pH 7.1. Microseeds were used for nucleation of the crystals. |