5KMN
TrkA JM-kinase with 1-(2-methyl-4-phenyl-pyrimidin-5-yl)-3-[[2-(trifluoromethyl)phenyl]methyl]urea
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-10-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 52.150, 52.150, 228.530 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.300 - 2.140 |
R-factor | 0.1951 |
Rwork | 0.194 |
R-free | 0.22230 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 1.010 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | BUSTER |
Refinement software | BUSTER-TNT |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.300 | 44.304 | 2.250 |
High resolution limit [Å] | 2.136 | 6.750 | 2.140 |
Rmerge | 0.103 | 0.515 | |
Rmeas | 0.155 | 0.115 | 0.569 |
Rpim | 0.049 | 0.039 | 0.179 |
Total number of observations | 201423 | 6387 | 29577 |
Number of reflections | 20356 | ||
<I/σ(I)> | 11.9 | 20.6 | 4.3 |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 9.9 | 8.9 | 10 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 50mM MES pH 6.5, 150 mM NaCl, 5mM TCEP, 0.1% beta-OctylGlucoside |