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5KF4

Crystal structure of FN3 domain (Residues P368-P466) of Human collagen XX

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2015-12-15
DetectorADSC QUANTUM 315r
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths56.476, 78.597, 81.989
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.864 - 2.500
R-factor0.2587
Rwork0.258
R-free0.28370
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3tes
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5002.620
High resolution limit [Å]2.5002.500
Rmerge0.0490.186
Number of reflections14950
<I/σ(I)>2212
Completeness [%]98.199.9
Redundancy6.86.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529380mM Magnesium Acetate, 50mM Sodium Cacodylate (pH6.5), 30%(w/v) PEG4000

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PDB entries from 2024-05-15

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