5KEW
Vibrio parahaemolyticus VtrA/VtrC complex bound to the bile salt taurodeoxycholate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-19 |
Detector | DECTRIS PILATUS3 X 1M |
Wavelength(s) | 0.97926 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.385, 71.276, 203.726 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.638 - 2.103 |
R-factor | 0.1982 |
Rwork | 0.197 |
R-free | 0.23100 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.487 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX (1.10.1_2155) |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.638 | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.079 | 0.037 | 0.362 |
Rmeas | 0.090 | ||
Rpim | 0.043 | ||
Total number of observations | 176526 | ||
Number of reflections | 45762 | ||
<I/σ(I)> | 9.4 | ||
Completeness [%] | 95.6 | 97.7 | 79.4 |
Redundancy | 3.9 | 4.1 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 2.0 M ammonium sulfate, 0.1 M sodium acetate, 0.5 mM taurodeoxycholine, 22.5% ethylene glycol |