5KDX
IMPa metallopeptidase in complex with T-antigen
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-05-28 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 99.410, 133.100, 103.780 |
Unit cell angles | 90.00, 103.12, 90.00 |
Refinement procedure
Resolution | 48.120 - 2.400 |
R-factor | 0.2038 |
Rwork | 0.201 |
R-free | 0.25415 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5kdv |
RMSD bond length | 0.009 |
RMSD bond angle | 1.283 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.120 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.139 | 0.472 |
Number of reflections | 102258 | |
<I/σ(I)> | 7.1 | 2.3 |
Completeness [%] | 99.6 | 100 |
Redundancy | 3.7 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 291 | PEG 3350, NaH2PO4, Bicine pH 9 |