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5K1J

Human TTR altered by a rhenium tris-carbonyl Pyta-C8 derivative

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 2
Synchrotron siteSOLEIL
BeamlinePROXIMA 2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-04-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.175919
Spacegroup nameP 21 21 2
Unit cell lengths42.820, 83.100, 65.340
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.550 - 1.690
R-factor0.17391
Rwork0.171
R-free0.22199
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4pme
RMSD bond length0.020
RMSD bond angle2.027
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.740
High resolution limit [Å]1.6901.690
Rmerge0.0330.631
Number of reflections49863
<I/σ(I)>22.922.22
Completeness [%]99.192.4
Redundancy3.452.88
CC(1/2)1.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6293protein: 10 mg/ml Dialysed in 100 milli-M NaCl, 50 milli-M sodium acetate, pH 5.5 precipitant: 21% polyethylene glycol 4,000 (PEG4K), 0.14 M imidazole malate, pH 6.0 cryosoak: 40% SM2 (12.5 % ethylene glycol, 12.5 % glycerol, 12.5 % 1,2-propanediol, 25 % DMSO and 37.5% 1,4-dioxane) 50% PEG 8K and 0.2 milli-M of rhenium tris-carbonyl Pyta-C8 derivative.

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PDB entries from 2024-05-15

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