5K0P
Crystal structure of the archaeosine synthase QueF-Like in the apo form
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-11-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97607 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.210, 124.995, 74.404 |
Unit cell angles | 90.00, 112.27, 90.00 |
Refinement procedure
Resolution | 69.000 - 1.940 |
R-factor | 0.1589 |
Rwork | 0.155 |
R-free | 0.23850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jyx |
RMSD bond length | 0.021 |
RMSD bond angle | 2.247 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.000 | 1.980 |
High resolution limit [Å] | 1.940 | 1.940 |
Rmerge | 0.049 | 0.685 |
Number of reflections | 77458 | |
<I/σ(I)> | 8.1 | 1.8 |
Completeness [%] | 99.8 | 99.8 |
Redundancy | 7.4 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 17-19% PEG3350, 0.15 M potassium thiocyanate, and 0.05% sodium azide. |