5JVO
Crystal structure of the Arginine Repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE W01B-MX2 |
Synchrotron site | LNLS |
Beamline | W01B-MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-08 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.458 |
Spacegroup name | P 21 3 |
Unit cell lengths | 83.191, 83.191, 83.191 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.000 - 1.900 |
R-factor | 0.1819 |
Rwork | 0.180 |
R-free | 0.22490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ere |
RMSD bond length | 0.026 |
RMSD bond angle | 2.372 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.000 | 48.030 | 2.020 |
High resolution limit [Å] | 1.900 | 5.680 | 1.900 |
Rmerge | 0.079 | 0.032 | 0.899 |
Number of reflections | 15299 | ||
<I/σ(I)> | 20.81 | 65.66 | 2.15 |
Completeness [%] | 99.9 | 99.4 | 99.5 |
Redundancy | 10.5 | ||
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 100 mM Tris-HCl 200 mM NaCl 10% ethanol |