5JLW
AntpHD with 15bp DNA duplex R-monothioated at Cytidine-8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | BRUKER D8 QUEST |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2015-12-09 |
Detector | BRUKER PHOTON 100 |
Wavelength(s) | 1.5418 |
Spacegroup name | P 2 2 21 |
Unit cell lengths | 61.266, 75.888, 93.696 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.298 - 2.088 |
R-factor | 0.2193 |
Rwork | 0.218 |
R-free | 0.24240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xid |
RMSD bond length | 0.009 |
RMSD bond angle | 1.117 |
Data reduction software | SAINT |
Data scaling software | PROTEUM PLUS |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.300 | 2.190 |
High resolution limit [Å] | 2.088 | 2.090 |
Rmerge | 0.079 | 0.503 |
Number of reflections | 48110 | |
<I/σ(I)> | 11.99 | 1.84 |
Completeness [%] | 97.5 | 92.1 |
Redundancy | 5.72 | 4.28 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 292 | 20mM bis-Tris propane, 10mM NiCl2, 4-6% 2-methyl-2,4-pentanediol |