5JIH
Crystal structure of HER2 binding IgG1-Fc (Fcab STAB19)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-27 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.968627 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.657, 79.465, 140.503 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.819 - 1.663 |
R-factor | 0.2001 |
Rwork | 0.198 |
R-free | 0.23070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jii |
RMSD bond length | 0.013 |
RMSD bond angle | 1.488 |
Data reduction software | XDS (VERSION Oct 15, 2015) |
Data scaling software | XDS |
Phasing software | PHENIX (Dev. Ver 1.10-2247) |
Refinement software | PHENIX (dev_1894) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.820 | 1.722 |
High resolution limit [Å] | 1.663 | 1.663 |
Rmerge | 0.058 | 1.231 |
Number of reflections | 65106 | |
<I/σ(I)> | 8.87 | 0.63 |
Completeness [%] | 98.0 | 92 |
Redundancy | 3.7 | 3 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 0.05 M TRIS, 22% (w/v) PEG 3350 |