5JIC
Staphylococcus aureus Type II pantothenate kinase in complex with a pantothenate analog
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-26 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97949 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 57.387, 136.746, 73.947 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.000 - 1.400 |
R-factor | 0.1435 |
Rwork | 0.142 |
R-free | 0.17400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m7x |
RMSD bond length | 0.012 |
RMSD bond angle | 1.300 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.21) |
Phasing software | MOLREP (11.1.03) |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.000 | 43.000 | 1.480 |
High resolution limit [Å] | 1.400 | 4.430 | 1.400 |
Rmerge | 0.067 | 0.529 | |
Number of reflections | 57601 | ||
<I/σ(I)> | 13 | 7.8 | 1.4 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 9.3 | 8.9 | 9.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 0.5 UL PROTEIN + 0.5 UL BUFFER (35% PEG3350, 0.1 M TRIS, 0.2 M MAGNESIUM CHLORIDE, PH 8.5) |