5JHP
Crystal structure of the rice Topless related protein 2 (TPR2) N-terminal topless domain (1-209) L179A and I195A mutant in complex with rice D53 repressor EAR peptide motif
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-07-02 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9786 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 77.999, 64.066, 106.971 |
Unit cell angles | 90.00, 97.03, 90.00 |
Refinement procedure
Resolution | 25.810 - 3.150 |
R-factor | 0.2347 |
Rwork | 0.232 |
R-free | 0.28380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zhe |
RMSD bond length | 0.005 |
RMSD bond angle | 0.852 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.370 |
High resolution limit [Å] | 3.150 | 3.150 |
Rmerge | 0.128 | 0.920 |
Number of reflections | 18401 | |
<I/σ(I)> | 10.5 | 1.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.2 | 6.4 |
CC(1/2) | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 20% w/v Polyethylene glycol 3350, 0.2 M Lithium sulfate monohydrate, pH 6.0 |