Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JFT

Zebra Fish Caspase-3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-06-19
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths56.910, 77.869, 135.671
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.920 - 2.280
R-factor0.179
Rwork0.175
R-free0.23100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.890
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 Overall
Low resolution limit [Å]33.918
High resolution limit [Å]2.282
Number of reflections27818
<I/σ(I)>3.1
Completeness [%]98.8
Redundancy5.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION8.5291Crystals were obtained at 18 deg. C by the hanging drop vapor diffusion method using 4 uL drops that contained equal volumes of protein and reservoir solutions over a 0.5 mL solution of 100 mM sodium citrate, pH 5.1, 17.5% PEG 6000, 10 mM DTT, and 3 mM NaN3. Crystals appeared within 14 days and were briefly immersed in cryogenic solution containing 10% 2-methylpentane-2,4-diol and 90% reservoir solution.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon