5J9M
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 2-(methylamino)-1H-benzo[d]imidazole-5-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.3 |
Synchrotron site | BESSY |
Beamline | 14.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-12-16 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.895 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 90.971, 64.946, 70.662 |
Unit cell angles | 90.00, 96.30, 90.00 |
Refinement procedure
Resolution | 45.210 - 1.330 |
R-factor | 0.1308 |
Rwork | 0.129 |
R-free | 0.15710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1p0d |
RMSD bond length | 0.005 |
RMSD bond angle | 0.808 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1-2155_1492: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.210 | 1.410 |
High resolution limit [Å] | 1.330 | 1.330 |
Rmerge | 0.045 | 0.489 |
Number of reflections | 93288 | |
<I/σ(I)> | 14.3 | 2.3 |
Completeness [%] | 99.2 | 98.4 |
Redundancy | 2.9 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 288 | 13% PEG 8000,100mM MES, 1mM DTT, 10% DMSO |