5J8G
Structure of nitroreductase from E. cloacae complexed with para-nitrobenzoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-ID-B |
Synchrotron site | APS |
Beamline | 14-ID-B |
Temperature [K] | 115 |
Detector technology | CCD |
Collection date | 2002-10-10 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.410, 113.440, 82.290 |
Unit cell angles | 90.00, 101.55, 90.00 |
Refinement procedure
Resolution | 19.923 - 1.900 |
R-factor | 0.1696 |
Rwork | 0.166 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.538 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | CNS |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.923 | 20.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.080 | 1.900 |
Rmerge | 0.064 | 0.270 | |
Rmeas | 0.077 | 0.323 | |
Rpim | 0.042 | 0.176 | |
Completeness [%] | 98.4 | 97.6 | |
Redundancy | 3.2 | 3.2 | |
CC(1/2) | 0.990 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 278 | 100 mM homopipes (pH 4.8), 20 mM para-nitrobenzoic acid, and 13% w/v polyethylene glycol 4000. Protein at 4.75 mg/ml initial concentration in 10 mM HEPES (pH 7.0) and 50 mM KCl |