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5J06

Structure of the immune receptor CD33 in complex with 3'-sialyllactose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-05-08
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.920
Spacegroup nameP 21 21 21
Unit cell lengths65.050, 127.060, 142.830
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution62.255 - 2.660
R-factor0.2106
Rwork0.209
R-free0.24410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ihb
RMSD bond length0.003
RMSD bond angle0.603
Data reduction softwarexia2
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((dev_2313: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]62.2552.755
High resolution limit [Å]2.6602.660
Rmerge0.0900.919
Number of reflections34631
<I/σ(I)>11.71.48
Completeness [%]100.0100
Redundancy4.34.4
CC(1/2)0.997
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5295.152% PEG 20,000, 4% PEG MME 500, 100 MM BICINE/TRIS BASE PH 8.5, 1XMORPHEUS AMINO ACIDS. CRYSTALS SOAKED IN 20 MM 3'-SIALYLLACTOSE IN MOTHER LIQUOR FOR 10 DAYS.

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