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5IYQ

Protruding domain of GII.4 human norovirus CHDC2094 in complex with HBGA type B (triglycan)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2015-07-27
DetectorADSC QUANTUM 315r
Wavelength(s)0.97625
Spacegroup nameI 2 2 2
Unit cell lengths89.810, 105.930, 135.480
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.167 - 1.410
R-factor0.1277
Rwork0.126
R-free0.15590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5iyn
RMSD bond length0.007
RMSD bond angle1.235
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.1701.440
High resolution limit [Å]1.4006.2601.400
Rmerge0.0720.0270.893
Number of reflections126435
<I/σ(I)>15.4756.271.91
Completeness [%]99.797.998.9
Redundancy5.9
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6291Sodium citrate, PEG3350

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