5ISY
Crystal structure of Nudix family protein with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-08 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.411, 98.702, 113.739 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.000 - 2.354 |
R-factor | 0.1852 |
Rwork | 0.182 |
R-free | 0.24440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gb5 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.009 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 2.440 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.057 | 0.187 |
Number of reflections | 25141 | |
<I/σ(I)> | 25.69 | |
Completeness [%] | 99.4 | |
Redundancy | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | PEG 3350, Sodium Malonate, Bis-Tris |