Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5IRS

crystal structure of the proteasomal Rpn13 PRU-domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2012-11-02
DetectorADSC QUANTUM 315
Wavelength(s)0.979
Spacegroup nameP 21 21 21
Unit cell lengths42.555, 56.476, 64.089
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.451 - 1.796
R-factor0.1713
Rwork0.167
R-free0.20920
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2r2y
RMSD bond length0.019
RMSD bond angle1.501
Data reduction softwareHKL-2000 (HKL-2000)
Data scaling softwareHKL-2000 (HKL-2000)
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_1218)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.830
High resolution limit [Å]1.7961.800
Rmerge0.0660.960
Number of reflections14838
<I/σ(I)>15.721.82
Completeness [%]99.196.35
Redundancy64.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293PEG4000, Sodium acetate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon