Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5INQ

Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Ca2+ complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-08-07
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths54.702, 67.504, 167.529
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.077 - 1.848
R-factor0.1594
Rwork0.158
R-free0.19480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4gz1
RMSD bond length0.010
RMSD bond angle1.074
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.920
High resolution limit [Å]1.8483.9901.850
Rmerge0.0680.0480.564
Number of reflections53955
<I/σ(I)>11.1
Completeness [%]99.999.3100
Redundancy65.76
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7295100 mM HEPES, 14-18% PEG3350, 200 mM sodium acetate, 25 mM magnesium acetate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon