5IFU
Crystal Structure of Prolyl-tRNA synthetase (ProRS, Proline--tRNA ligase) from Plasmodium falciparum in complex with Glyburide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-10-13 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.979490 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 138.310, 138.310, 156.660 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 43.737 - 2.450 |
| R-factor | 0.1863 |
| Rwork | 0.185 |
| R-free | 0.21290 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4q15 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.668 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER (2.5.6) |
| Refinement software | PHENIX (dev_1819) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 43.737 | 43.737 | 2.510 |
| High resolution limit [Å] | 2.450 | 10.960 | 2.450 |
| Rmerge | 0.066 | 0.026 | 0.533 |
| Number of reflections | 56139 | ||
| <I/σ(I)> | 18.69 | 38 | 4.15 |
| Completeness [%] | 99.5 | 90.5 | 100 |
| Redundancy | 7.5 | ||
| CC(1/2) | 0.999 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | at 22mg/ml, incubated with 5mM glyburide, then 1:1 with Morpheus(g2): 10% PEG-8000, 20% ethylene glycol, 0.1M MES/imidazole, pH=6.5, 0.03M each sodium formate, ammonium acetate, trisodium citrate, sodium potassium tartrate, sodium oxamate |






