5IA5
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with golvatinib (E7050)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 80.094, 104.715, 34.758 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.825 - 1.776 |
R-factor | 0.1996 |
Rwork | 0.197 |
R-free | 0.24370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1mqb |
RMSD bond length | 0.008 |
RMSD bond angle | 1.022 |
Data reduction software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.825 | 1.880 |
High resolution limit [Å] | 1.776 | 1.780 |
Rpim | 0.060 | 0.905 |
Number of reflections | 54138 | |
<I/σ(I)> | 17.92 | |
Completeness [%] | 99.3 | |
Redundancy | 6.94 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 37.5 % MPD_P1k_P3350, 0.1 M AminoAcidsMix, 0.1 M Tris pH 6.5 |