5I9Q
Crystal structure of 3BNC55 Fab in complex with 426c.TM4deltaV1-3 gp120
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-08-02 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 122.850, 122.850, 264.960 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 37.543 - 3.000 |
| R-factor | 0.2523 |
| Rwork | 0.251 |
| R-free | 0.26970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3rpi |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.955 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.17) |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.690 | 39.690 | 3.100 |
| High resolution limit [Å] | 2.990 | 11.590 | 2.990 |
| Rmerge | 0.559 | 0.057 | 6.502 |
| Rmeas | 0.585 | ||
| Rpim | 0.171 | ||
| Total number of observations | 585694 | ||
| Number of reflections | 47150 | ||
| <I/σ(I)> | 9.2 | ||
| Completeness [%] | 99.5 | 97.7 | 95.7 |
| Redundancy | 12.4 | 10.7 | 11.8 |
| CC(1/2) | 0.974 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M sodium citrate pH 5.5, 18% (w/v) PEG 1,000, 3% (v/v) ethylene glycol |
