Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5I8E

Crystal Structure of Broadly Neutralizing HIV-1 Fusion Peptide-Targeting Antibody VRC34.01 Fab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-03-15
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1
Spacegroup nameI 4
Unit cell lengths114.606, 114.606, 174.082
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.314 - 2.655
R-factor0.1891
Rwork0.186
R-free0.24810
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4jpi
RMSD bond length0.010
RMSD bond angle1.532
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.740
High resolution limit [Å]2.6505.7102.650
Rmerge0.1230.0840.807
Rmeas0.144
Rpim0.072
Total number of observations100033
Number of reflections30065
<I/σ(I)>12.9
Completeness [%]92.988.995.1
Redundancy3.33.33.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.2M Zinc Acetate, 0.1M Sodium Cacodylate pH6.5 and 15% PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon