5I07
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-Amino-4-(2-phenylethyl)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-13 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.133, 78.854, 85.171 |
Unit cell angles | 90.00, 108.99, 90.00 |
Refinement procedure
Resolution | 19.870 - 1.890 |
R-factor | 0.1926 |
Rwork | 0.191 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1p0d |
RMSD bond length | 0.008 |
RMSD bond angle | 0.858 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1-2155_1492) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.870 | 2.010 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.493 | |
Number of reflections | 67732 | |
<I/σ(I)> | 11.3 | 2.7 |
Completeness [%] | 98.3 | 95.8 |
Redundancy | 4.3 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 288 | 13% PEG 8000,100mM MES, 1mM DTT, 10% DMSO |