5HVV
Crystal structure of Pro1 deletion and M2A double mutant of Macrophage Migration Inhibitory Factor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-03-15 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.598, 67.627, 88.460 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.900 - 1.900 |
R-factor | 0.1723 |
Rwork | 0.171 |
R-free | 0.19110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3djh |
RMSD bond length | 0.020 |
RMSD bond angle | 1.729 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 23.900 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.029 | 0.020 | 0.102 |
Total number of observations | 162540 | ||
Number of reflections | 32624 | ||
<I/σ(I)> | 42.4 | ||
Completeness [%] | 99.7 | 96.6 | 99.9 |
Redundancy | 5 | 4.8 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 2 M ammonium sulfate, 3% 2-propanol, 0.1 M Tris-HCl, pH 7.5 |