5HKW
Crystal Structure of Apo c-Cbl TKBD Refined to 2.25 A Resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 159.116, 106.523, 84.984 |
Unit cell angles | 90.00, 92.13, 90.00 |
Refinement procedure
Resolution | 42.463 - 2.250 |
R-factor | 0.1825 |
Rwork | 0.180 |
R-free | 0.23380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bum |
RMSD bond length | 0.013 |
RMSD bond angle | 0.975 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.6) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.120 | 45.120 | 2.300 |
High resolution limit [Å] | 2.250 | 10.550 | 2.250 |
Rmerge | 0.058 | 0.021 | 0.640 |
Total number of observations | 227494 | 2209 | 15071 |
Number of reflections | 67019 | ||
<I/σ(I)> | 14.5 | 49.9 | 2 |
Completeness [%] | 99.7 | 95.8 | 99.8 |
Redundancy | 3.4 | 3.4 | 3.4 |
CC(1/2) | 0.999 | 0.999 | 0.781 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20% (w/v) PEG 3350, 0.2M sodium citrate dibasic trihyrate |