5HJI
Crystal Structure of Pyrococcus abyssi Trm5a complexed with adenosine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | Cu FINE FOCUS |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2015-11-05 |
| Detector | OXFORD ONYX CCD |
| Wavelength(s) | 1.5 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 52.727, 54.718, 128.948 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 24.574 - 2.200 |
| R-factor | 0.1954 |
| Rwork | 0.193 |
| R-free | 0.23610 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5hjk |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.809 |
| Data reduction software | CrysalisPro |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 24.574 | 2.320 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.129 | 0.550 |
| Number of reflections | 19382 | |
| <I/σ(I)> | 8 | 2.3 |
| Completeness [%] | 99.2 | 98.8 |
| Redundancy | 3.4 | 3.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 10-15% PEG3350, 100mM HEPES, pH7.5, 100mM Ca(OAc)2 and 100mM KCl |






