5HGM
Hexameric HIV-1 CA in complex with dATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-09-11 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 6 |
Unit cell lengths | 90.810, 90.810, 56.680 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.980 - 2.040 |
R-factor | 0.2373 |
Rwork | 0.236 |
R-free | 0.26320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3h4e |
RMSD bond length | 0.007 |
RMSD bond angle | 0.991 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.3.12) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.980 | 45.980 | 2.080 |
High resolution limit [Å] | 2.030 | 9.090 | 2.030 |
Rmerge | 0.112 | 0.035 | 0.551 |
Rpim | 0.077 | 0.023 | 0.418 |
Total number of observations | 46558 | 527 | 2061 |
Number of reflections | 16259 | ||
<I/σ(I)> | 8.2 | 27.7 | 1.9 |
Completeness [%] | 94.9 | 85.8 | 69.1 |
Redundancy | 2.9 | 3.1 | 2.4 |
CC(1/2) | 0.993 | 0.997 | 0.420 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | PEG550MME (13-14%), KSCN (0.15M), TRIS (0.1M, pH 8.5), 10mM dATP |