5HEB
The third PDZ domain from the synaptic protein PSD-95 in complex with a C-terminal peptide derived from CRIPT
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-E SUPERBRIGHT |
| Temperature [K] | 289 |
| Detector technology | IMAGE PLATE |
| Collection date | 2012-09-12 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54178 |
| Spacegroup name | P 41 3 2 |
| Unit cell lengths | 89.771, 89.771, 89.771 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 40.147 - 1.650 |
| R-factor | 0.1694 |
| Rwork | 0.167 |
| R-free | 0.19450 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1be9 |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.220 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.10pre_2104) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.147 | 1.703 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.034 | 0.289 |
| Number of reflections | 15083 | |
| <I/σ(I)> | 61.571 | 2.478 |
| Completeness [%] | 97.6 | 76 |
| Redundancy | 13.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | Peptide was included in protein buffer to a final molar ratio of 2:1 relative to protein. Reservoir solution contained 1 M sodium citrate, pH 7.0. Equal amounts (1.5 microliters) of protein (9 mg/mL) and reservoir solution were mixed and equillibrated against 500 microliters of crystallization buffer. |






