5H8O
Crystal structure of an ASC-binding nanobody in complex with the CARD domain of ASC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-02-19 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.979100 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 53.625, 30.996, 79.244 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.240 - 4.206 |
R-factor | 0.303 |
Rwork | 0.300 |
R-free | 0.35560 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.151 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.240 | 79.240 | 4.430 |
High resolution limit [Å] | 4.200 | 13.280 | 4.200 |
Rmerge | 0.824 | 0.313 | 1.158 |
Rpim | 0.349 | 0.139 | 0.477 |
Total number of observations | 12955 | 463 | 1967 |
Number of reflections | 2025 | ||
<I/σ(I)> | 2.1 | 3.2 | 2 |
Completeness [%] | 99.0 | 99.2 | 100 |
Redundancy | 6.4 | 5.9 | 6.7 |
CC(1/2) | 0.736 | 0.913 | 0.638 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.5 | 291 | 0.1 M citric acid at pH 3.5 and 3 M sodium chloride |