5GSU
Crystal structure of nucleosome core particle consisting of human testis-specific histone variants, Th2A and Th2B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-01-28 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 107.095, 109.740, 182.445 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.330 - 3.100 |
R-factor | 0.2 |
Rwork | 0.197 |
R-free | 0.25700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3x1u |
RMSD bond length | 0.012 |
RMSD bond angle | 1.350 |
Data scaling software | HKL-2000 (Scala) |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 3.150 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.129 | |
Number of reflections | 38482 | |
<I/σ(I)> | 20 | |
Completeness [%] | 96.8 | 98.9 |
Redundancy | 12.3 | 9.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 20mM Pottasium Cacodylate pH 6.0, 60-70mM KCl, 70-90mM MnCl2 |