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5G1E

The complex structure of syntenin-1 PDZ domain with c-terminal extension

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]77
Detector technologyCCD
Spacegroup nameP 21 21 21
Unit cell lengths52.740, 63.318, 103.620
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.030 - 1.920
R-factor0.23399
Rwork0.232
R-free0.27983
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.708
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.950
High resolution limit [Å]1.9201.920
Rmerge0.0500.350
Number of reflections27216
<I/σ(I)>41.24.3
Completeness [%]97.999.3
Redundancy10.76.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
10.1 M BIS-TRIS (PH 6.5), 25% (W/V) POLYETHYLENE GLYCOL 3350

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PDB entries from 2024-05-15

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