5G0H
Crystal structure of Danio rerio HDAC6 CD2 in complex with (S)- trichostatin A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Detector | DECTRIS PILATUS 2M |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.980, 48.230, 73.780 |
Unit cell angles | 90.00, 103.22, 90.00 |
Refinement procedure
Resolution | 23.430 - 1.600 |
R-factor | 0.1515 |
Rwork | 0.150 |
R-free | 0.17410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | HOMOLOGY MODEL |
RMSD bond length | 0.010 |
RMSD bond angle | 0.990 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | BUSTER (2.11.5) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.640 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.080 | 0.710 |
Number of reflections | 44152 | |
<I/σ(I)> | 10.2 | 1.6 |
Completeness [%] | 96.7 | 83.8 |
Redundancy | 3.2 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 15% PEG 3350, 0.1M KCL |