5FKC
Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with Raffinose
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-01-23 |
| Detector | DECTRIS PILATUS 6M |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 74.621, 204.767, 146.502 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 119.150 - 1.820 |
| R-factor | 0.17022 |
| Rwork | 0.169 |
| R-free | 0.18484 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5ann |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.402 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 119.150 | 1.850 |
| High resolution limit [Å] | 1.820 | 1.820 |
| Rmerge | 0.070 | 0.590 |
| Number of reflections | 200149 | |
| <I/σ(I)> | 9.6 | 2.6 |
| Completeness [%] | 99.6 | 99.5 |
| Redundancy | 6.8 | 6.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | 6.5 | PROTEIN WAS CRYSTALLIZED FROM 1.3M SODIUM CITRATE TRIBASIC DIHYDRATE, 0.1M BIS-TRIS PROPANE PH 6.5, THEN SOAKED IN 30MM RAFFINOSE |
