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5F0P

Structure of retromer VPS26-VPS35 subunits bound to SNX3 and DMT1(L557M) (SeMet labeled)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2015-04-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97895
Spacegroup nameC 1 2 1
Unit cell lengths371.290, 75.320, 57.270
Unit cell angles90.00, 97.66, 90.00
Refinement procedure
Resolution56.760 - 2.780
R-factor0.2209
Rwork0.219
R-free0.26050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5f0l
RMSD bond length0.007
RMSD bond angle1.135
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]56.76156.7612.940
High resolution limit [Å]2.7708.2302.770
Rmerge0.0660.0240.904
Rmeas0.0780.0291.073
Total number of observations271917
Number of reflections77507294112013
<I/σ(I)>12.1744.871.33
Completeness [%]99.199.195.3
CC(1/2)0.9990.9990.808
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62910.8 M AmSO4, 0.1 M MES pH 6.0, 10% Glycerol

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